Hi there, I was having an issue with the legacy pa...
# tools
g
Hi there, I was having an issue with the legacy params and the new Nextflow version
26.10.1
, since the auto type detection in Nextflow has been disabled, now trying to set a flag to
false
(e.g.
--skip_multiqc false
) will interpret this as string "false" which will be truthy because Groovy interprets strings as true. I therefore went ahead and ported all params for
nf-core/airrflow
to the new params block in
<http://main.nf|main.nf>
. However, now I'm having some failures in the pipeline linting for the
nextflow.config
and the
nextflow_schema.config
since the params are no longer in
nextflow.config
. For now I'm disabling these linting tests, but let me know if there is a better way to deal with this right now.
n
That's currently the way to do it until it's officially supported by the tooling 🙂
👍 1
g
Perfect, thanks for the quick confirmation!
n
No problem 😛