A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<!channel> We have started discussions on how to handle the 10x Atera data. At the moment, we are considering two possible approaches:
1. Creating a new dedicated pipeline, or
2. Extending the existing spatialxe pipeline with merged functionality, potentially under a new name.
To help us make an informed decision, I would like to organize a meeting in the upcoming days. It would be great to have 1–2 people from nf-core join the discussion as well. This is also relevant for the upcoming release for spatialxe.

Please indicate your availability here (Times are chosen to covere US (PDT) and Europe (CEST)):
<https://terminplaner6.dfn.de/p/af34e62b7d17c357bd7e2887f15d1403-1761456>

the meeting will not happen. We had a meeting now with the xpatial team and we came to a decisison. We just need to clarify a few details.