Hello, thanks for the work on demultiplex! The gro...
# demultiplex
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Hello, thanks for the work on demultiplex! The group is starting to process raw data from NovaSeq6000 with dual adapters and UMIs, so I am in the painful process of learning conversion cbcl 🥲 My latest issue was the fastq files are not transferred from the work to the output directory, but the pipeline is successfully run (fastqc files, etc everything good). This was on demultiplex 1.7.1 with nextflow 26.04.0. I solved it by downgrading back with
NXF_VER=25.10.5 nextflow run
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[main] ERROR nextflow.script.WorkflowMetadata - Failed to invoke `workflow.onComplete` event handler
groovy.lang.MissingMethodException: No signature of method: sun.nio.fs.UnixPath.rightShift() is applicable for argument types: (String) values: [XXXXXXXXXXXXX_S1_L001_R1_001.fastq.gz]
Possible solutions: leftShift([B), leftShift(java.io.InputStream), leftShift(java.lang.Object)