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nf-core

<https://github.com/nf-core/test-datasets/pull/2049|#2049 Test SVCFs for octopusv/merge generated with ONT data from SK-N-AS cell line>
Pull request opened by <https://github.com/manascripts|manascripts>
This pull request documents the addition new variant call format (VCF) files generated using severus and cutesv from ONT's long-read sequencing of the SK-N-AS cell line. The primary change is the addition of a new subfolder and descriptions for two new SVCF files under the `octopusv` subfolder.
Details on the SVCF format can be found here: <https://github.com/ylab-hi/OctopuSV/blob/main/docs/SVCF_specifications.md|SVCF specs>
New data documentation:
• Added an `octopusv` subfolder under `genomics/vcf/homo_sapiens/genome/vcf` to organize files generated using the octopusv/correct pipeline.
• Documented two new SVCF files, `sk-n-as-sniffles-ont.svcf` and `sk-n-as-severus-ont.svcf`, both derived from ONT data using different variant callers (`sniffles` and `severus`) for the SK-N-AS cell line.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

Review on #2049 Test SVCFs for octopusv/merge generated with ONT data from SK-N-AS cell line
Review approved by <https://github.com/itrujnara|itrujnara> on <https://github.com/manascripts|manascripts's> pull request
The number of contigs is a bit high, but I'll assume it's the best it can be. Looks fine now.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/2049|#2049 Test SVCFs for octopusv/merge generated with ONT data from SK-N-AS cell line>
Pull request merged by <https://github.com/manascripts|manascripts>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>