A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/2046|#2046 SRR28679756_raw_matrix.h5ad converted to 10x Matrix Market format>
Pull request opened by <https://github.com/alecw|alecw>
For testing cellbender/removebackground with 10x Matrix Market input
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

Review on #2046 SRR28679756_raw_matrix.h5ad converted to 10x Matrix Market format
Review comment by <https://github.com/apps/copilot-pull-request-reviewer|Copilot> on <https://github.com/alecw|alecw's> pull request
*Pull request overview*

Note
Copilot was unable to run its full agentic suite in this review.
Adds documentation for a converted scRNA-seq gene expression matrix (SRR28679756) in 10x Matrix Market format to support testing `cellbender/removebackground` with 10x-style inputs.
*Changes:*
• Add a README describing the 10x Matrix Market output files (matrix/barcodes/features).
• Document the mapping/limitation that `features.tsv.gz` lacks gene IDs and repeats gene names.

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<https://github.com/nf-core/test-datasets|nf-core/test-datasets>