Mahesh Binzer-Panchal
05/06/2026, 8:45 AMnf-core modules patch with nf-core 4.0.2, and noticed it wrote out several config files for modules. The containers_conda_lock_files_arm64.config contains
process { withName: 'FASTQC' { container = 'modules/nf-core/fastqc/.conda-lock/linux_arm64-bd-e455e32f745abe68_1.txt' } }
process { withName: 'MULTIQC' { container = 'modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-d167b8012595a136_1.txt' } }
Shouldn't this be
process { withName: 'FASTQC' { conda = 'modules/nf-core/fastqc/.conda-lock/linux_arm64-bd-e455e32f745abe68_1.txt' } }
process { withName: 'MULTIQC' { conda = 'modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-d167b8012595a136_1.txt' } }
? Or how is the container directive used in the conda settings ?mashehu
05/06/2026, 8:51 AMMahesh Binzer-Panchal
05/06/2026, 8:52 AMmashehu
05/06/2026, 8:52 AMMahesh Binzer-Panchal
05/06/2026, 8:52 AMmashehu
05/06/2026, 8:53 AMmashehu
05/06/2026, 8:55 AMJonathan Manning
05/06/2026, 8:57 AM