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Can you confirm that the consensus VCF should be a...
# sarek
i
Igor Trujnara
04/29/2026, 9:06 AM
Can you confirm that the consensus VCF should be a normal GZIP, not a blocked one? I'm getting some errors from downstream tools
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Rike Hanssen
04/29/2026, 9:35 AM
https://github.com/nf-core/sarek/blob/4bd2948f98c5bf7b785c91cf6708fffccab25467/modules/local/consensus_from_sites/main.nf#L50-L52
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Igor Trujnara
04/29/2026, 10:15 AM
Weird, something must be wrong on my side cause
file
clearly shows a normal gzip
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Rike Hanssen
04/29/2026, 10:30 AM
phew obama
(for me)
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