A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/2007|#2007 Reduce PXD009752 SDRF to a single raw file>
Pull request opened by <https://github.com/jonasscheid|jonasscheid>
*Summary*

Drops the second row (`IP_lung_1T_060317_2.raw`) from `testdata/PXD009752.sdrf.tsv`, leaving a single-file SDRF for the mhcquant CI test profile.

*Why*

The two-file SDRF exhausts the default 40 GB EBS volume on the nf-core <http://runs-on.com|runs-on.com> CI runner (raw download + mzML conversion + Docker images). A one-file test still exercises the full SDRF/PRIDE input path end-to-end.
Related to <https://github.com/nf-core/mhcquant/pull/445|nf-core/mhcquant#445>.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

Review on #2007 Reduce PXD009752 SDRF to a single raw file
Review approved by <https://github.com/mashehu|mashehu> on <https://github.com/jonasscheid|jonasscheid's> pull request
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/2007|#2007 Reduce PXD009752 SDRF to a single raw file>
Pull request merged by <https://github.com/jonasscheid|jonasscheid>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>