Salim Bougouffa
04/20/2026, 8:52 AMSalim Bougouffa
04/20/2026, 8:53 AMnextflow run nf-core-mag_5.4.2/5_4_2 -offline
curl: (7) Failed to connect to <http://www.nextflow.io|www.nextflow.io> port 443 after 7115 ms: Couldn't connect to server
N E X T F L O W ~ version 25.10.4
ERROR ~ Unable to parse config file: '/scratch/bougous/bandwidth/mag/wf01_spikedHost/nf-core-mag_5.4.2/5_4_2/nextflow.config'
Cannot read config file include: <https://raw.githubusercontent.com/nf-core/configs/master/nfcore_custom.config>
-- Check '.nextflow.log' file for detailsJames Fellows Yates
04/20/2026, 10:00 AMJames Fellows Yates
04/20/2026, 10:01 AMnf-core-mag_5.4.2/5_4_2? and there is no -offline parameter as far as I know?Salim Bougouffa
04/20/2026, 11:28 AMnf-core-mag_5.4.2/5_4_2 is what nf-core pipelines download <pipeline> basically downloadsSalim Bougouffa
04/20/2026, 11:29 AM-offline is a nextflow run -help optionJames Fellows Yates
04/20/2026, 11:31 AMJames Fellows Yates
04/20/2026, 11:31 AMJames Fellows Yates
04/20/2026, 11:31 AMJames Fellows Yates
04/20/2026, 1:10 PM