Hi all! I'm running into the dreaded No space left...
# nf-test
n
Hi all! I'm running into the dreaded No space left of Device error when running tests in Github, and came across this PR: https://github.com/askimed/nf-test/pull/358. Is there any timeline for having this merged? And if so, how should github actions be configured to use the
--no-save
option?
m
is this for an nf-core module/pipeline?
n
m
if you run a lot of tests, try bumping
max_shards
in
nf-test.yml
to 10 or higher (means less tests are run per job)
n
Thanks, I'll give it a go!
Setting shards higher is helping, thanks!
I'm still running out of space during container fetching on one shard, just on singularity. Any tips? https://github.com/nf-core/funcprofiler/actions/runs/24218460740/job/70777193139
m
either bump it to 15, to spread them even more. or increase the storage volume of the runners https://docs-archive--nf-core-docs.netlify.app/docs/guidelines/pipelines/requirements/ci_testing#increasing-disk-space-for-ci-runners
j
Just wanted to flag I've largely solved these disk issues like this: https://github.com/nf-core/rnaseq/pull/1816#discussion_r3136226075 ... but we'll hopefully get native cleanup at some point https://nfcore.slack.com/archives/C049MBCEW06/p1775557592999389