<#1968 Add pod5 test data: HG002 ONT 10-read subse...
# test-data
g
#1968 Add pod5 test data: HG002 ONT 10-read subset (GIAB PAW70337, 5kHz R10.4.1) Pull request opened by sahuno Summary • Adds
data/genomics/homo_sapiens/nanopore/pod5/HG002_PAW70337_giab_10reads.pod5
(2.2 MB, 10 reads) • Needed for the
dorado/basecaller
nf-core module (see nf-core/modules#XXXX) • Public data from ONT's open data S3 bucket — no authentication required Source
Copy code
<s3://ont-open-data/giab_2025.01/flowcells/HG002/PAW70337/pod5/PAW70337_66b2eea5_de8117b1_33.pod5>
• Sample: HG002 (NIST/Genome in a Bottle reference) • Chemistry: 5kHz, R10.4.1 • Run: PAW70337 (released 2025-01-14) • Subset: 10 reads extracted with
pod5 subset
from the original 530 MB file Test plan • Pod5 file opens correctly with
pod5 view
• File can be basecalled with
dorado basecaller
in nf-core module test 🤖 Generated with Claude Code nf-core/test-datasets
Review on #1968 Add pod5 test data: HG002 ONT 10-read subset (GIAB PAW70337, 5kHz R10.4.1) Review approved by dialvarezs on sahuno's pull request Looks good to me. nf-core/test-datasets