Hi @Jasmin Frangenberg! Given that you're already dealing with some AmpCombi2 problems these days, could you also have a look at the following issue report on GitHub? https://github.com/nf-core/funcscan/issues/524

That's a bug. The outputs should not overlap with each other. You can report the bug at https://nf-co.re/modules/ampcombi2_parsetables/ and ping the maintainer. In

copy

mode, it will not cause any problem.

Yes, I saw it already! Thank you for reporting. I'll update the module once the new ampcombi release (with bug fixes and doc updates) is out. ✨ If you're depending on it, I can also update the current version in the meantime while I am waiting for AMPcombi code reviews.