A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/1954|#1954 Add genoflu test FASTA for influenza genotyping module>
Pull request opened by <https://github.com/cwoodside1278|cwoodside1278>
*Description*

Add test FASTA for the `genoflu` nf-core module.
The test file is a complete H5N1 HPAI influenza genome with all eight gene  
segments (PB2, PB1, PA, HA, NP, NA, MP, NS), taken directly from the GenoFLU  
repository's own test data. This sample is expected to genotype as *A1*  
(fully Eurasian).

*Related*

• nf-core/modules issue: <https://github.com/nf-core/modules/issues/11038|nf-core/modules#11038>
• GenoFLU source: <https://github.com/USDA-VS/GenoFLU/tree/main/test|https://github.com/USDA-VS/GenoFLU/tree/main/test>

*File added*

• `data/genomics/virus/influenza/fasta/test-genome-A1.fasta`
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

Review on #1954 Add genoflu test FASTA for influenza genotyping module
Review approved by <https://github.com/mashehu|mashehu> on <https://github.com/cwoodside1278|cwoodside1278's> pull request
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/1954|#1954 Add genoflu test FASTA for influenza genotyping module>
Pull request merged by <https://github.com/cwoodside1278|cwoodside1278>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>