A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/1895|#1895 add files for hificnv testing for pacvar>
Pull request opened by <https://github.com/chaochaowong|chaochaowong>
Add the following test files to support `HiFiCNV `and `sawfish` CNV calling in pacvar v1.1.0. These files are used for testing the `pacvar` v1.1.0dev configuration `test_wgs_hificnv.config`.
1. `samplesheet_pb_downsampled.csv` – A sample sheet referencing the downsampled PacBio BAM file  
`test-datasets/modules/data/genomics/homo_sapiens/pacbio/bam/NA03697B2_downsampled.pbmm2.repeats.bam`,  
used for testing the `pbmm2 ` and `hificnv` nf-core modules.
2. `genome3.fasta` – The reference FASTA used to align the BAM file specified in `samplesheet_pb_downsampled.csv`. It was copied from `test-datasets/modules/data/genomics/homo_sapiens/genome/genome3.fasta`.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/1895|#1895 add files for hificnv testing for pacvar>
Pull request merged by <https://github.com/chaochaowong|chaochaowong>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>