Michael Heuer
03/06/2026, 4:04 PM-profile test to confirm all of my compute environment settings are correct; with version 3.23.0 it fails with
The following invalid input values have been detected:
* --igenomes_base (<s3://ngi-igenomes/igenomes/>): could not validate file format of '<s3://ngi-igenomes/igenomes/>': Access Denied (Service: S3, Status Code: 403, Request ID: ...) (SDK Attempt Count: 1)
-- Check script '.nextflow/assets/nf-core/rnaseq/subworkflows/nf-core/utils_nfschema_plugin/main.nf' at line: 68
Works fine with 3.21.0, so I don't think it is actually an S3 issue, rather something wrong with validation in nf-schemaMaxime Garcia
03/06/2026, 4:06 PMJonathan Manning
03/06/2026, 4:29 PMJonathan Manning
03/06/2026, 4:36 PMJonathan Manning
03/06/2026, 4:38 PMMichael Heuer
03/06/2026, 4:39 PMJonathan Manning
03/06/2026, 4:40 PMMichael Heuer
03/06/2026, 4:41 PMJonathan Manning
03/06/2026, 4:42 PMMichael Heuer
03/06/2026, 4:43 PM--no-sign-request or equivalentJonathan Manning
03/06/2026, 4:44 PMMaxime Garcia
03/06/2026, 4:45 PMMichael Heuer
03/06/2026, 4:46 PM<s3://ngi-igenomes> bucket that should use `--no-sign-request`/`anonymous` config, all other buckets are privateJonathan Manning
03/06/2026, 4:47 PMMaxime Garcia
03/06/2026, 4:53 PM<s3://annotation-cache> as wellFelix Krueger
03/06/2026, 4:55 PMMichael Heuer
03/06/2026, 4:56 PM