Thanks to Phil, Ben, and Edmund for talking about ...
# wg-meta-pipelines
m
Thanks to Phil, Ben, and Edmund for talking about nf-cascade. I wrote up some of the technical details, if you're curious how things like resume work in nf-cascade. https://github.com/mahesh-panchal/nf-cascade/wiki/Technical-details ( and I made the proof of concept run again 😅 -
pixi run chain
or
pixi run demo
)
🙌 4
p
Nice, thanks Mahesh! 'cc @Ben Sherman @Edmund
e
@Mahesh Binzer-Panchal Aside, but I've just chained pipelines with the pixi task runner before 😆
So the only limit to chaining pipelines is one's imagination think about it
m
Yeah. I like that method too. I prefer that to this to be honest.
❤️ 1
People seem dissatisfied with having separate pipelines
e
What do you think of snakemake modules ? What about wrappers?
m
I've not really used Snakemake. Isn't that what started off this whole thing in the first place? The ability to fetch modules/subworkflows over http? And people wanted a Nextflow native way to do the same.