A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

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Hi all, newbie here, hope to get any useful insights from you guys. My pipeline is failling at 2 deeptools steps as shown below. I have left quite enough CPUs and memory but not sure what would be the reason why it still says out of memory. Here is my config file: profiles {
  local {
    process.executor = 'local'
    executor.$local.cpus = 4
  }

  standard {
    process.executor = 'slurm'
    process.cpus = 12
    process.memory = '128 GB'
  }

  genomics {
    process.executor = 'slurm'
    process.memory = '64 GB'
    process.clusterOptions = {task.time &gt; 4.hour ? '' : '--qos genomics --time=0-4:00:00' }
    process.queue = { task.time &gt; 4.hour ? 'comp' : 'genomics' }
  }
}