'delocalizing' the RSEM quantification subworkflow...
# request-reviewj
Jonathan Manning
02/12/2026, 12:14 PM'delocalizing' the RSEM quantification subworkflow from rnaseq: https://github.com/nf-core/modules/pull/9995 (tests still running, but I'm confident)
✅ 1
Jonathan Manning
02/12/2026, 2:07 PMTests passing, good to go! https://github.com/nf-core/modules/pull/9995
✅ 1
Jonathan Manning
02/13/2026, 9:54 AMCan I persuade anyone? Promise it's code that's been working in rnaseq for years, just formalising it as an nf-core subworkflow and adding in the tximport stuff.
✅ 1
m
Maxime Garcia
02/13/2026, 10:05 AMJust ping me
j
Jonathan Manning
02/13/2026, 10:09 AMThanks @Maxime Garcia 🙂
🙏 1
Jonathan Manning
02/13/2026, 12:10 PMCan I fix an oopsie to this? https://github.com/nf-core/modules/pull/10021
👀 1
Jonathan Manning
02/13/2026, 12:22 PMLooks like the CI is unwell https://nfcore.slack.com/archives/CE5LG7WMB/p1770985253748149
🚫 1
Jonathan Manning
02/13/2026, 2:48 PMThis is just the workflow deployment of the above if you had time at some point: https://github.com/nf-core/rnaseq/pull/1697
👀 1
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