``` usr bin env bash C e u o pipefail read duplication py i nf-core #rnaseq

```#!/usr/bin/env bash -C -e -u -o pipefail read_d...

Michael Heskett

12/17/2025, 5:11 PM

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#!/usr/bin/env bash -C -e -u -o pipefail
read_duplication.py \
    -i rnaseq.markdup.sorted.bam \
    -o tumor_rnaseq \


cat <<-END_VERSIONS > versions.yml
"NFCORE_RNASEQ:RNASEQ:BAM_RSEQC:RSEQC_READDUPLICATION":
    rseqc: $(read_duplication.py --version | sed -e "s/read_duplication.py //g")
END_VERSIONS

this is the command from the command log

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