<https://github.com/nf-core/modules/pull/9569> I w...
# wg-container-conversion-task-forcej
Júlia Mir
12/15/2025, 2:46 PMhttps://github.com/nf-core/modules/pull/9569 I would need to merge this to finish up the testing in my tools PR, do you think it's ok to merge?
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Maxime Garcia
12/15/2025, 3:02 PMI'd say GO FOR IT
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Evangelos Karatzas
12/15/2025, 3:02 PMcompared to this: https://nf-co.re/blog/2024/seqera-containers-part-2#changes-to-metayml
singularity is missing the https:
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Júlia Mir
12/15/2025, 3:03 PMah right, do you know how to obtain this?
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Evangelos Karatzas
12/15/2025, 3:04 PMon seqera platform where I create containers, you just click the show https checkbox 😛
party this 1
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Maxime Garcia
12/15/2025, 3:04 PMyou click on the get the httplink
Maxime Garcia
12/15/2025, 3:05 PMif you don't have the build link anymore, you can reverse engineer it via the id
Maxime Garcia
12/15/2025, 3:05 PMor asking for the same container/platform should do the trick
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Júlia Mir
12/15/2025, 3:05 PMoh I was trying to use the command line 😄 is there a way to do it through the wave command? we would need this for the other tools commands
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Maxime Garcia
12/15/2025, 3:05 PMOooh
Maxime Garcia
12/15/2025, 3:06 PMthere should be a way to get it
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Júlia Mir
12/15/2025, 3:36 PMmaybe someone else from <!subteam^S08LAB76NBU> knows? 👀
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Phil Ewels
12/15/2025, 3:53 PMThere is but it's faffy which is why I wrote a script for it. Didn't you take over this exact script the other week @Júlia Mir ? 😅
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Júlia Mir
12/15/2025, 3:59 PMI tried but gave up 🙊 the script wasn't returning all the URLs, only docker. then discovered Julian and Yuxin had already done the work! only the https url is missing
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Phil Ewels
12/15/2025, 4:03 PMPhil Ewels
12/15/2025, 4:06 PMTo do it manually with the CLI:
Phil Ewels
12/15/2025, 4:07 PM Copy code
wave --inspect -o yaml -i <oras://community.wave.seqera.io/library/fastqc:0.12.1--104d26ddd9519960>Phil Ewels
12/15/2025, 4:07 PMUntitled.yaml
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Júlia Mir
12/15/2025, 6:31 PMthaaank you! keanu thanks
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Julian Flesch
12/15/2025, 9:00 PMSorry Julia, this was still missing from the new Is it safe to assume the url is always f"{hostName}/{imageName}/blobs/{digest}"? (instead of understanding what happens if we have many layers 🙈~)~
modules containerp
Phil Ewels
12/15/2025, 10:10 PMSingularity builds only ever have a single layer
Phil Ewels
12/15/2025, 10:11 PMAlso I don't think it's safe to assume anything, better to use the API results directly
Phil Ewels
12/15/2025, 10:11 PMFor example, last time I was using this, the URLs always had
/dataPhil Ewels
12/15/2025, 10:12 PMSo presumably something has changed there within the Wave build system
Phil Ewels
12/15/2025, 10:12 PMThat, or I got something wrong.. 🤔
Phil Ewels
12/15/2025, 10:13 PMSearching FastQC on seqera.io/containers and doing Singularity + https gives this:
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<https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/e0/e0c976cb2eca5fee72618a581537a4f8ea42fcae24c9b201e2e0f764fd28648a/data>Phil Ewels
12/15/2025, 10:14 PMWhich does have the
/dataPhil Ewels
12/15/2025, 10:15 PMahh no, the script just manually does some stuff to get the data URL, not just taking it directly:
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digest = layers[0]["digest"].replace("sha256:", "")
url = f"<https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/{digest[:2]}/{digest}/data>"Phil Ewels
12/15/2025, 10:15 PMHope that makes sense!
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