Hi <!here>, oncoanalyser 2.3.0 has been released, notable changes include: Tooling _BamTools_: run only on specified regions in targeted mode _CIDER_: performance improvements _SAGE_: run MT calling by default, improve germline filters _PURPLE_: • new outputs CNV (chromosome arm data; region-specific data) • new amplification / deletion thresholds in driver gene panel file _LINX_: new CN data tracks for targeted sequence data Other Removed custom re-mapping for ALT alignments prior to LILAC Enabled GH Actions nf-test workflow for pipeline tests (using minified simulated t/n WGTS data) Added HCC1395 tumor / normal WGS (depths respectively 80x, 40x) and tumor WTS for full test profile Improved samplesheet validation See here for the oncoanalyser CHANGELOG.md and Release notes. Thanks to everyone involved in this release and to the Hartwig folks for tooling updates and contributing recommended changes

Congrats @Stephen Watts and team, great to see these improvements coming through and excited to see us settling into a release routine