A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Hi Again,
In *Observer.groovy , how can I find the names of the files that were produced by a cached/completed process ?

So far, I only found handler.task.getOutputFilesNames() ( returns something like '*.txt' ) or  handler.task.getOutputEvals() (empty map )

OK, got it, the sequera AI suggested to list the files in the workfing dir and to use  the pattern  against those files.

This is how nf-prov does it: <https://github.com/nextflow-io/nf-prov/blob/acd49e1c83c00b1d2d55b9ba106d123619a8f903/src/main/groovy/nextflow/prov/util/ProvHelper.groovy#L98-L108>

And it's what I would recommend as best practice in general