Hi all, I'd like to propose developing a Traitar-based trait annotation module (https://github.com/hzi-bifo/traitar), so it can be used downstream of nf-core/bacass or Bactopia. Would anyone be interested ?

Interested in someone else writing it you mean?

Yes 😊 I can take the lead on drafting the Traitar module. Before I start, I’d appreciate feedback on whether this module is needed and compatible with bacass/Bactopia outputs, and I’ll also need someone who can review the PRs once it's ready.

I see. Reviewing is not a problem. For bacass, I think @Daniel_VM is the current main developer, and probably the best person to ask. @Daniel Straub is from the same group and they may know. For bactopia @Robert A. Petit III is the benevolent dictatorthere

Missed this, I wonder if traitar3 might be better for this? https://github.com/nick-youngblut/traitar3

Perfect! I will create an issue today and start the module development! 😊