Hello! I got an error with the GTDBTK_SUMMARY module:

Either --summaries, --filtered_bins, --failed_bins or --qc_discarded_bins must be specified!

I see from the

.command.sh

that the command used was:

summary_gtdbtk.py --extension fa     --out gtdbtk_summary.tsv

So it is missing something there. I am a bit unsure what this is related to, is it the input or the database?