Hi all, I’m interested in running funscan against ...
# funcscan
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Hi all, I’m interested in running funscan against a large list of annotated plant genomes. It seems like I would need to skip the early prokaryotic-focused steps (2 & 3 on the intro page) as well as integrate plantiSMASH to replace antiSMASH. I’m fairly new genome mining for AMPs, ARGs, and BGCs, so I thought it would be smart to check in here first before starting to play around with a fork of the workflow. Is swapping antiSMASH for plantiSMASH even very feasible? Are there other issues I’m not considering that I should be aware of? Any help would be amazing! Thank you for creating this awesome tool!