Hello viralrecon team! <@U08PYSNDC1W> and me are f...
# viralrecon
s
Hello viralrecon team! @Anna Norén and me are facing a small problem with viralrecon snaps. After the last pangolin module update there are two options: 1. Either you give it a path to the pangolin data 2. Or the pipeline will download the latest version of pangolin data every time, and it will save it in the outdir folder (for reproducibility purposes) So for the snaps consistency this is a small problem and we are considering these three options, but we are not sure about which is the best one: 1. Remove all pangolin results from the snaps (as they contain the pangolin-data version on them) 2. Update the snaps every time the pangolin-data change (even if the pangolin version doesn't change). This will conflict with automatic merging if pangolin-data is updated. 3. Add a compressed version of the latest pangolin-data to test-datasets and use it for all the test, so it remains constant until pangolin version is updated. Which one do you think it is more accurate?¿ I think either 2 or 3 are good options, but 3 will be easier to matain (I think). pangolin-data database conpressed is 45Mb
3️⃣ 3
j
s
Agree, option 3 is the best for me, with 1 tests are meaningless, y 2 also meaningless and messier
🎉 1