I'm considering writing a module that takes sorted...
# modules
j
I'm considering writing a module that takes sorted, fixmated BAM files and streams them through
samtools merge
and
samtools markdup
. Reckon this would be a good fit for the official modules repo, and if so what a good name would be? I see there is already
samtools/sormadup
, but I was thinking something simpler like
samtools/mergemarkdup
?