Hi! Am I the only one getting errors when pulling ...
# pipeline-maintainers
o
Hi! Am I the only one getting errors when pulling apptainer containers with Nextflow version 25.10.0? I am getting a very peculiar error:
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Caused by:
  Cannot invoke "nextflow.util.Duration.toMillis()" because "this.pullTimeout" is null
I was able to reproduce the error with a simple test script:
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# <http://test.nf|test.nf>
process FOO {
    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
        '<https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/45/45bebbd72993260a3549ab9fb73d60faef9052fd7a1e752e4987708f8e93b4f9/data>':
        '<http://community.wave.seqera.io/library/seqkit:2.10.1--924c175d0c15a9be|community.wave.seqera.io/library/seqkit:2.10.1--924c175d0c15a9be>' }"

    script:
    """
    seqkit -h
    """
}

workflow {
    FOO()
}
First test with :
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NXF_VER=25.04.8 nf run <http://test.nf|test.nf> -profile apptainer
it should work. Now delete you apptainer cache ad run:
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NXF_VER=25.10.0 nf run <http://test.nf|test.nf> -profile apptainer
and I guess you should see the same error as me... What do you think? Should I raise an issue on Nextflow's Github?
p
I've not seen it elsewhere, but it looks suspect
Please create an issue on the NF GitHub and post the link here, I'll flag it to the team
o
Hi! Someone else has already posted an issue about this actually: https://github.com/nextflow-io/nextflow/issues/6517
👀 1
p
Thanks!