Good morning everyone 😄 ,
We just had a very productive call between myself and @Famke Bäuerle.
We discussed several points regarding the future development of the variantprioritization pipeline;
• The next step for this project will be to bring the development of a generalized workflow to the next nf-core hackathon (October 28, 2025).
• @Famke Bäuerle will attend the hackathon in person, which will be a great opportunity to gather valuable feedback from the community.
• We agreed to aim for a first release that includes the integration of PCGR / CPGR and a generalized workflow focused on SNPs and indels.
For future releases, we already plan to extend the workflow to handle structural variants. However, we also agreed that a key aspect of this project will be to engage more collaborators — to share experiences, ideas, and bring real value to the community.
We are very enthusiastic about this work and hope to inspire others with our energy and vision! 🍀