Hi All! I'm looking for a Nextflow expert for a (mostly) straightforward WGS pipeline on Seqera. We’re receiving raw FASTQs (and potentially VCFs) and need a clean, reproducible WGS pipeline on Seqera that runs on AWS with GRCh38, then packages outputs for Fabric intake for clinical sign-out. What we need • Stand up or adapt nf-core/sarek on Seqera (AWS Batch), pinned and auditable. • FASTQ -> alignment, BQSR, variant calling, QC; ingest partner VCFs where appropriate. • Manage references/indices (GRCh38), containers, caching, and provenance. • Export CRAM/VCF/QC in a Fabric-compatible handoff; provide a minimal runbook + test dataset. Timeline: We're an NYC-based health tech, so as soon as possible, but ideally 2 weeks for initial implementation; light support afterward. Please DM me if interested! 🙏