Hello! I recently added a bunch of modules from th...
# tools
e
Hello! I recently added a bunch of modules from the 'rastair' toolkit (rastair/call, rastair/mbias, rastair/mbias_parser...) which are used within the recently added subworkflow bam_taps_conversion. However, when installing this subworkflow through the nf-core toolkit I get this error: ~/methylseq$ nf-core subworkflows install bam_taps_conversion INFO Installing 'bam_taps_conversion' ERROR Module 'rastair/mbias/parser' not found in available modules The issue I can see here is that the toolkit is is reading the underscore in the module name as a backslash, hence not finding it, even though I can install such workflow using nf-core modules install rastair/mbias_parser Is there a way to still install that subworkflow through the nf-core CLI or should I make a PR and rename the module removing the underscore? Thanks!
m
you need to rename the modules i am afraid, we don't allow any kind non-alphanumeric values in names https://nf-co.re/docs/guidelines/components/modules#name-format-of-module-files