A It
09/12/2025, 8:54 PMNFCORE_RNASPLICE:RNASPLICE:VISUALISE_MISO:GTF_2_GFF3 terminated with an error exit status (1)
Command executed:
gffread genomic.gtf -L --keep-genes | awk -F'\t' -vOFS='\t' '{ gsub("transcript", "mRNA", $3); print}' > genomic_genes.gff3
cat <<-END_VERSIONS > versions.yml
"NFCORE_RNASPLICERNASPLICEVISUALISE_MISO:GTF_2_GFF3":
gffread: $(gffread --version 2>&1)
END_VERSIONS