conf/uppmax/
├── nextflow.config                    # Renamed from uppmax.config
├── README.md                         # Keep existing
└── pipelines/                        # Rename from 'pipeline'
    ├── ampliseq/
    │   ├── nextflow.config           # Rename from ampliseq.config
    │   └── README.md                 # Rename from ampliseq.md
    └── sarek/
        ├── nextflow.config           # Move from conf/pipeline/sarek/uppmax.config
        └── README.md                 # Move from docs/pipeline/sarek/uppmax.md

Also looking for opinions on this restructuring of configs! https://github.com/nf-core/configs/pull/854

How many configs actually use these subconfigs?