Is subworkflow linting failing for everyone?
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# toolss
Simon Pearce
08/29/2025, 2:58 PMIs subworkflow linting failing for everyone?
https://github.com/nf-core/modules/actions/runs/17326884554/job/49193164562?pr=8962 on the CI but I also get the same on gitpod
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Simon Pearce
09/08/2025, 7:56 AMCan anyone take a look at this? Still getting the same issue on the modules repo.
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Maxime Garcia
09/08/2025, 8:01 AMIll have a look
j
JĂșlia Mir
09/08/2025, 8:11 AMI think it's because we got rid of all pytests! đ„ł and now our old
pytest_modules.ymlm
Maxime Garcia
09/08/2025, 8:14 AMoh, so we should delete ALL pytests then?
j
JĂșlia Mir
09/08/2025, 8:15 AMwe already did I think
JĂșlia Mir
09/08/2025, 8:15 AMI can fix the error on the dev version of tools
JĂșlia Mir
09/08/2025, 8:15 AMand then I think we can already remove the
pytest_modules.ymlm
Maxime Garcia
09/08/2025, 8:17 AMđ
Maxime Garcia
09/08/2025, 8:17 AMplease let me know if there's anything I can do
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Simon Pearce
09/08/2025, 8:20 AMAh, ok, I was going to remove the pytest files in a separate PR, but it could happen in this one
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Maxime Garcia
09/08/2025, 8:21 AMyeah, go for all in one
j
JĂșlia Mir
09/08/2025, 8:25 AMhttps://github.com/nf-core/tools/pull/3748 can you review this?
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Maxime Garcia
09/08/2025, 8:28 AMEasy to review
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JĂșlia Mir
09/08/2025, 8:49 AMthanks! it is merged now, so tests should pass again
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