cf <https://nf-co.re/atacseq/2.1.2/parameters/#max...
# atacseqm
Maxime Garcia
08/21/2025, 2:47 PMcf https://nf-co.re/atacseq/2.1.2/parameters/#max_memory (you probably need to check
show hiddenj
J-P
08/21/2025, 2:51 PMOk I will check. Lemme see about this show hidden bit
J-P
08/21/2025, 2:54 PMWow nice! Do you have insights on how I can run using SLURM to execute processes instead of local?
m
Maxime Garcia
08/21/2025, 2:55 PMI would recommend creating a custom config file
Maxime Garcia
08/21/2025, 2:56 PMsomething similar to this should do the trick: https://github.com/nf-core/configs/blob/master/conf/scw.config
Maxime Garcia
08/21/2025, 2:57 PMand if you're lucky, someone in your institution has already made such a config file
🙏 1
Maxime Garcia
08/21/2025, 2:57 PMyou can check in https://nf-co.re/configs to see if your institution exists
Maxime Garcia
08/21/2025, 2:57 PMotherwise, if you want help to create such a config, hop on to #CGRTMASKY
j
J-P
08/21/2025, 3:50 PMI will look in to the institutional config and thanks for your rapid responses to my issues!
m
Maxime Garcia
08/21/2025, 4:02 PMAlways happy to help out