I have been trying to run Nf-core/airflow on our h...
# airrflow
w
I have been trying to run Nf-core/airflow on our hpc system and the setup test went smoothly. But it kept completing with error at RNASeq CHANGEO_PARSEDB_SELECT_LOCUS. Attached is .nextflow.log and input samples sheet as well as the notes for the run. [wuw5@cn0009 airrflow_test_250728]$ cat batch1_TR_sample_test.tsv sample_id filename_R1 filename_R2 subject_id species locus tissue sex age biomaterial_providersingle_cell pcr_target_locus 250508_P01_D11 /data/CAVD/FNA_test/FNA_2025/batch1_VDJ_fastq/250508_P01_D11_S321_R1_001.fastq.gz /data/CAVD/FNA_test/FNA_2025/batch1_VDJ_fastq/250508_P01_D11_S321_R2_001.fastq.gz C10158024 human TR lymph node NA NA sequencing_facility TRUE TR 250508_P01_E01 /data/CAVD/FNA_test/FNA_2025/batch1_VDJ_fastq/250508_P01_E01_S322_R1_001.fastq.gz /data/CAVD/FNA_test/FNA_2025/batch1_VDJ_fastq/250508_P01_E01_S322_R2_001.fastq.gz C10158024 human TR lymph node NA NA sequencing_facility TRUE TR Can you let me know what I should change?-- Check script '/data/wuw5/.nextflow/25.04.2/assets/nf-core/airrflow/modules/local/changeo/changeo_parsedb_select_locus.nf' at line: 8 or see '.nextflow.log' file for more details ERROR ~ Pipeline failed.