Jim Downie
07/25/2025, 12:48 PMModule compilation error
> - file : /home/runner/_work/modules/modules/modules/nf-core/vamb/bin/tests/../main.nf
> - cause: Variable `abundance_tsv` already defined in the process scope @ line 35, column 58.
> ance_tsv ? "--abundance_tsv ${abundance_
The offending line in the module script is:
def depth_input = abundance_tsv ? "--abundance_tsv ${abundance_tsv}" : "--bamdir bams/"
https://github.com/nf-core/modules/actions/runs/16522217562/job/46726603941?pr=8816Jim Downie
07/25/2025, 12:52 PMdef but that doesn't seem so clean...Nicolas Vannieuwkerke
07/25/2025, 12:53 PM25.04.0 and up if I remember correctly 😛Jim Downie
07/25/2025, 12:54 PMNextflow v25.04.6Simon Pearce
07/25/2025, 12:54 PMJim Downie
07/25/2025, 12:54 PM> N E X T F L O W ~ version 24.10.2Jim Downie
07/25/2025, 12:56 PMNicolas Vannieuwkerke
07/25/2025, 12:59 PMNicolas Vannieuwkerke
07/25/2025, 12:59 PM