Did you ask him by any chance to reactivate biocon...
# metro-maps
j
Did you ask him by any chance to reactivate bioconda-maintanance of interproscan for this new version? 😁 That would be really helpful for some pipelines which use an old version of it (#C02K5GX2W93, #C084HP11VPF the latter built a local container due to the lack of new versions on bioconda etc.)
j
But are you running the whole pipeline in a module?
j
Yes! That's what nf-core/interprocscan is already doing, just not up-to-date, because the last bioconda version is
5.59
(current release is
5.75
) and will be
6.0
soon as it looks like from the presentation.
j
The thing is that
6.0
is a complete nextflow workflow, actually yesterday he was asking @Júlia Mir and me whether it will be possible to port it to an nf-core module but we told him that in principle should be a pipeline as he mentioned they have an ad-hoc image to run it with obsolete programs (old gcc versions to compile them) that probably will be imposible to include in a bioconda recipe
😲 1
If I find him again will try to directly ask your question
👍 1