Hey everyone, I'm also working with 10 tumor-normal paired DNA samples (WES) and matched tumor RNA-seq. From the May 15th 2024 thread with @Stephen Watts and others, I understand that WES is treated as targeted and I need to generate panel-specific resource files. I'm currently looking to generate the panel-specific reference files, and learn if the support for tumor-normal WES in targeted mode is now merged or if there’s a patch I can apply. Would appreciate guidance or example configurations. Thanks

Hi Chiamaka, the resource generation mode in oncoanalyser is coming in the next release (2.2) which should be coming within a month - let me know if your analysis can wait for that long ! 🙂

Hi Rayan, thanks for the update! My analysis timeline is flexible, so I can wait for the 2.2 release. I’ll keep an eye out for it.