Hi everyone. I have matched single-cell samples from 10x genomics VDJ and Parse TCR seq that I would like to benchmark and compare. Can I process the Parse samples with airrflow? What metrics would be useful to look at in terms of a technology comparison? I have both datasets already processed to a

Seurat / SingleCellExperiment

object.

Hi Cathal so far only 10x genomics single cell data is supported starting from fastq files, or data that has been pre-processed and stored in the AIRR rearrangement format.