A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Thanks! And is this hmmsearch changing the representative sequence of each family?

Yep, instead of the mmseqs cluster representative sequence, if you turn hmmsearch on (`--recruit_sequences_with_models true`) the family representative becomes the sequence that best aligns with each family's HMM

Got it. Thanks you. Is it possible to give scientific notation for evalue cutoff parameter of hmmer?

Uhmm, never tried it but don't think so. Give it a go and let us know :smile:

The validation schema is expecting a float value, so probably not