Dominik Stroh
03/12/2025, 9:13 AMMärz-12 10:02:28.291 [Actor Thread 69] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for
task: name=NFCORE_HIC:HIC:PREPARE_GENOME:CUSTOM_GETCHROMSIZES (1); work-dir=null
error [java.lang.IllegalStateException]: java.lang.IllegalStateException: Failed to pull singularity image
command: apptainer pull --name biocontainers-samtools-1.16.1--h6899075_1.img.pulling.1741770146007 <docker://biocontainers/samtools:1.16.1--h6899075_1> > /dev/null
status : 255
hint : Try and increase apptainer.pullTimeout in the config (current is "20m")
message:
INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see <https://apptainer.org/docs/admin/latest/singularity_migration.html>)
FATAL: While making image from oci registry: error fetching image to cache: failed to get checksum for <docker://biocontainers/samtools:1.16.1--h6899075_1>: reading manifest 1.16.1--h6899075_1 in docker.io/biocontainers/samtools: manifest unknown
https://hub.docker.com/r/biocontainers/samtools/tags?ordering=-last_updated