There's a training for "workflow of workflows" whi...
# wg-meta-pipelines
p
There's a training for "workflow of workflows" which may be worth looking at: https://training.nextflow.io/latest/side_quests/workflows_of_workflows/
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r
That is more to introduce
workflow {}
concept. We wanted to tackle daisy chaining pipelines here, which got a little abadoned .... 😞
j
Yep, kind of a separate thing. That's workflows of workflows in a Nextflow sense (= basically nf-core subworkflow usage)
I do think nf-core pipelines should be composable workflows though, or waffer-thin wrappers around subworkflows that are.
If the 'guts' of every Nexflow pipeline was a subworkflow (nf-core rather than local), we could separate the documentation, configuration stuff that makes the composition complex right now. Then we really could make a workflow that was e.g. rnaseq -> diffab (even though it's a different thing to the daisy chain thing this channel is for)