Hi all! I have a question regarding "tiseq" type. I had hoped that providing sample as "tiseq" will cause riboTISH to use it as -t .bam in ribotish predict - but it does not seem so (all TISCounts are 0 in _pred.txt output file). I seem to be missing something?

It's possible this wasn't wired through on first development, I don't thing we had test data for this. Please make an issue, and PRs welcome for the fix.

An enhancement issue for what I eventually want to do already exists: https://github.com/nf-core/riboseq/issues/17