I am running into an error running createpanelrefs on NIH's biowulf. I posted an issue on Github. The biowulf staff recommended running it specifying the fasta/fai/dict arguments so I tried that (command below). When I did that it ran mutect2 on all the samples, which it hadn't done before, but then ended with the same error. Slurm and nextflow logs attatched. Thanks for any suggestions!

REFDATA=/fdb/igenomes_nf/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta
nextflow run nf-core/createpanelrefs -r dev\
        -profile biowulf \
        --input ./PoN_samplesheet.csv \
        --outdir ./PoN \
        --fasta ${REFDATA}/Homo_sapiens_assembly38.fasta \
        --fai ${REFDATA}/Homo_sapiens_assembly38.fasta.fai \
        --dict ${REFDATA}/Homo_sapiens_assembly38.dict \
        --gcnv_analysis_type wes \
        --tools mutect2

`ERROR ~ Invalid method invocation

call

with arguments: [[id:null], [/gpfs/gsfs12/users/nextgen2/sierk/runx/nf/work/68/114044991ce258c4a6ce480fd5bb99/FPD_1077_SK221E.vcf.gz, <bunch of vcfs and tbis omitted> /fdb/igenomes_nf/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.dict] (java.util.LinkedList) on _closure6 type`