I’m still fairly new to nf-core pipelines so i’m wondering if this is an issue with the bacass pipeline or I’m doing something wrong with nextflow. I’m trying to use bacass with singularity but I get this error:

INFO:    Downloading network image
  message:
  hint   : Try and increase singularity.pullTimeout in the config (current is "20m")
  status : 143
  command: singularity pull  --name depot.galaxyproject.org-singularity-medaka-1.4.3--py38h130def0_0.img.pulling.1735227350219 <https://depot.galaxypro>>
  error [java.lang.IllegalStateException]: java.lang.IllegalStateException: Failed to pull singularity image
  task: name=NFCORE_BACASS:BACASS:MEDAKA (6); work-dir=null

However, in the

nextflow.config

I have the following code:

process {
    // General configurations
    singularity.pullTimeout = 2.h
}

Why is the

pullTimeout

not being applied to the Medaka image?