A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Can we get nf-core tools 3.0.+ not lint for nf-schema on a pipeline where we still use nf-validation?

yeah it should detect which plugin is used and lint accordingly :stuck_out_tongue:

do you have an example of where it doesn't do that?

private pipeline based on 2.14.1 TEMPLATE

now linting is failing because nf-core tools has updated to 3.0.2

I don't want to merge TEMPLATE already because of reasons

but I'm willing just to update the `.nf-core.yml` to make it work

or just change the linting GHA and pin tools to 2.14.1

I think if you update `.nf-core.yml` adding the nf-core version and update the linting GHA it should work