I encountered this warning and I don’t know if this is a potentially issue with the fetchngs pipeline or my own conda set up. I ran the following command

nextflow run nf-core/fetchngs -r 1.12.0 -profile conda --input ids_bioproject.csv --outdir results_2024-10-14_w-conda_bioproject

I received this warning in the output

WARN: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  There is a problem with your Conda configuration!

 

  You will need to set-up the conda-forge and bioconda channels correctly.

  Please refer to <https://bioconda.github.io/>

  The observed channel order is

  [conda-forge]

  but the following channel order is required:

  [conda-forge, bioconda, defaults]

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

My process completed, but I’m wondering if this could cause issues in the future regarding reproducibility. Does anyone know how to fix the channel order?