All of a sudden nextflow is submitting all my jobs...
# rnasplice
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All of a sudden nextflow is submitting all my jobs with an unlimited time limit for only the rnasplice pipeline, even though I set
--max_time 72.h
. Where should I begin to look? My HPC team checked me on this, and it's only happening with rnasplice. I've previously run this pipeline without issue as well with these same configs, I just added some additional samples. Here's my current squeue, as you can see the pipeline has been sitting for about a day now, with all jobs pending
and the log file now