A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Does anyone know how to solve this linting error in the `.nf-core.yml` ?
 <https://github.com/genomic-medicine-sweden/meta-val/actions/runs/11249608487/job/31276836614?pr=25>

you can see the correct structure of this file <https://nf-co.re/blog/2024/tools-3_0_0#nf-coreyml|here>

in your file, `files_exist` is both `false` and a list of files, I think you want to remove the `false`

<@U02JS8EFMMJ> I have removed the `false` you mentioned above. I got this error. Do you think this linting error caused by `TEMPLATE` : <https://github.com/genomic-medicine-sweden/meta-val/actions/runs/11253303866/job/31288279625?pr=25>

this is due to the template update, we are now using `nf-schema` instead of `nf-validation` and thus `nextflow.schema.json` has to be updated.

I would say if you want to merge this PR first, you can ignore the test, as long as it passes locally using nf-core 2.14.1